I have a couple of questions in regards to using tsMuxeR to create a blu-ray folder.

1) I have an MKV demuxed with eac3to into raw streams and then remuxed into an MKV with mkvmerge. If I was to add this mkv into tsMuxeR to create a blu-ray folder would I leave the options "Do not change SEI and VUI data" and "Continually insert SPS/PPS" as default?

2) If I was to skip creating the mkv and just use the demuxed streams made by eac3to and then add them to tsMuxeR to create a blu-ray folder. Again would I use the above settings as default?

3) Finally if I was to add an m2ts/mpls file from a compliant blu-ray folder would I leave the settings above as default?

The problem i have is whether to change the settings or leave them as they are. I've been searching but can't find a clear answer.