MultiAVCHD blu-ray chapters menu problem

[Ghjklbnm]

Hello, first time here. I'm just starting out using multiavchd and am currently putting together a BD disc for a fan edit. I have 13 manually set chapters on the project, but when going to my menu options and when I render the disc it only has two chapters in the chapter menu. I feel like there's a settings option I'm missing but I keep going through everything and can't find anything that might help. Does anyone have any idea what might be causing it to cut off the other chapters?

[sapruitt]

This has happened to me as well a few times. I've found that multiavchd renders the chapter menu better with mpeg2 source file. I have had some success with mkv, but it's hit and miss.