Handbrake problem (Mac) - will not display part of a logo (but it did once)

[boots27]

I put the .ass file (created with Aegisub) in the same mkv container. It plays fine with VLC.

The thing in question are the two logos/watermarks seen on the left upper and lower corners. I got it to hardsub ONCE in handbrake (no idea how), but I want to encode this same video with the same .ass file again but the logos don't appear anymore. I have a Mac and as far as I know, Handbrake is one of the few options I have to hardsub a video.

Is this a problem with Handbrake itself or with the .ass file?

Any help is appreciated.

[Budman1]

How did you get the logos in the .ass file or are they separate that Handbrake is adding along with the subtitles for you?

[boots27]

How did you get the logos in the .ass file or are they separate that Handbrake is adding along with the subtitles for you?

They are part of the .ass file. They were added in Aegisub. Like this:

[Baldrick]

What are your settings under the subtitles tab in handbrake?
Can you choose the subtitle track and select burn in?

[boots27]

What are your settings under the subtitles tab in handbrake?
Can you choose the subtitle track and select burn in?

Yes, I can choose the subtitle track an burn them in. I know they are burned in because I looked at the previews and everything else shows up just fine, except the logos. It's like Handbrake just refuses to acknowledge them this time, since I have already harsubbed a video this way with the same logos and it worked fine until now.