Hello, I'm from Albania. Sorry for my English.

I need to split video files and at the same time convert them to mp4 for a website.
I have troubles splitting AVI files (flv and mp4 worked fine).

Example:

ffmpeg -i original-1.avi -ss 00:03:00 -t 00:00:20 -acodec copy -vcodec libx264 -vpre hq -s 416x240 -y 1.mp4

Code:
Seems stream 0 codec frame rate differs from container frame rate: 30000.00 (30000/1) -> 25.00 (25/1)
Input #0, avi, from 'original-1.avi':
  Metadata:
    ISFT            : Nandub v1.0rc2
    INAM            : Rammstein - Links 2-3-4
    ISBJ            : Rammstein - Links 2-3-4
    IART            : 
    ICOP            : Coded by Hermit (DivX 5.0.3) 15.04.06
    ICMT            : 
  Duration: 00:03:34.48, start: 0.000000, bitrate: 1630 kb/s
    Stream #0.0: Video: mpeg4, yuv420p, 704x406 [PAR 1:1 DAR 352:203], 25 fps, 25 tbr, 25 tbn, 30k tbc
    Stream #0.1: Audio: mp3, 48000 Hz, 2 channels, s16, 160 kb/s
[libx264 @ 0x804215810]using SAR=1/1
[libx264 @ 0x804215810]using cpu capabilities: MMX2 SSE2Fast SSSE3 FastShuffle SSE4.2
[libx264 @ 0x804215810]profile High, level 1.3
[libx264 @ 0x804215810]264 - core 110 - H.264/MPEG-4 AVC codec - Copyleft 2003-2010 - http://www.videolan.org/x264.html - options: cabac=1 ref=4 deblock=1:0:0 analyse=0x3:0x113 me=umh subme=8 psy=1 psy_rd=1.00:0.00 mixed_ref=1 me_range=16 chroma_me=1 trellis=1 8x8dct=1 cqm=0 deadzone=21,11 fast_pskip=1 chroma_qp_offset=-2 threads=1 sliced_threads=0 nr=0 decimate=1 interlaced=0 constrained_intra=0 bframes=3 b_pyramid=0 b_adapt=2 b_bias=0 direct=3 weightb=1 open_gop=0 weightp=2 keyint=250 keyint_min=25 scenecut=40 intra_refresh=0 rc_lookahead=40 rc=abr mbtree=1 bitrate=200 ratetol=20.0 qcomp=0.60 qpmin=10 qpmax=51 qpstep=4 ip_ratio=1.41 aq=1:1.00
Output #0, mp4, to '1.mp4':
  Metadata:
    encoder         : Lavf52.64.2
    Stream #0.0: Video: libx264, yuv420p, 416x240 [PAR 1:1 DAR 26:15], q=10-51, 200 kb/s, 25 tbn, 25 tbc
    Stream #0.1: Audio: libmp3lame, 48000 Hz, 2 channels, 160 kb/s
Stream mapping:
  Stream #0.0 -> #0.0
  Stream #0.1 -> #0.1
Press [q] to stop encoding
[mpeg4 @ 0x804214410]Invalid and inefficient vfw-avi packed B frames detected
frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    frame=    0 fps=  0 q=0.0 size=       0kB time=10000000000.00 bitrate=   0.0kbits/s    
frame=    8 fps=  1 q=405.0 size=       0kB time=0.74 bitrate=   0.5kbits/s    
frame=   50 fps=  5 q=37.0 size=      13kB time=0.32 bitrate= 338.7kbits/s    
frame=   65 fps=  6 q=35.0 size=      38kB time=0.92 bitrate= 334.9kbits/s    
frame=   68 fps=  6 q=35.0 size=      43kB time=1.04 bitrate= 342.6kbits/s    
frame=   76 fps=  6 q=35.0 size=      56kB time=1.36 bitrate= 340.3kbits/s    
frame=   92 fps=  7 q=35.0 size=      85kB time=2.00 bitrate= 349.6kbits/s    
frame=  112 fps=  8 q=34.0 size=     118kB time=2.80 bitrate= 346.2kbits/s    
frame=  132 fps=  9 q=35.0 size=     158kB time=3.60 bitrate= 359.8kbits/s    
frame=  151 fps= 10 q=31.0 size=     193kB time=4.36 bitrate= 363.3kbits/s    
frame=  168 fps= 11 q=34.0 size=     223kB time=5.04 bitrate= 362.3kbits/s    
frame=  187 fps= 12 q=34.0 size=     258kB time=5.80 bitrate= 365.0kbits/s    
frame=  208 fps= 13 q=34.0 size=     292kB time=6.64 bitrate= 360.4kbits/s    
frame=  224 fps= 13 q=34.0 size=     316kB time=7.28 bitrate= 355.8kbits/s    
frame=  244 fps= 14 q=34.0 size=     350kB time=8.08 bitrate= 354.9kbits/s    
frame=  265 fps= 15 q=33.0 size=     373kB time=8.92 bitrate= 342.9kbits/s    
frame=  270 fps= 15 q=33.0 size=     382kB time=9.12 bitrate= 343.1kbits/s    
frame=  272 fps= 14 q=33.0 size=     384kB time=9.20 bitrate= 342.0kbits/s    
frame=  279 fps= 14 q=33.0 size=     392kB time=9.48 bitrate= 338.5kbits/s    
frame=  299 fps= 14 q=33.0 size=     416kB time=10.28 bitrate= 331.6kbits/s    
frame=  320 fps= 15 q=32.0 size=     451kB time=11.12 bitrate= 332.6kbits/s    
frame=  343 fps= 16 q=32.0 size=     483kB time=12.04 bitrate= 328.7kbits/s    
frame=  368 fps= 17 q=32.0 size=     513kB time=13.04 bitrate= 322.0kbits/s    
frame=  391 fps= 17 q=31.0 size=     543kB time=13.96 bitrate= 318.5kbits/s    
frame=  407 fps= 17 q=31.0 size=     572kB time=14.60 bitrate= 321.0kbits/s    
frame=  428 fps= 18 q=31.0 size=     608kB time=15.44 bitrate= 322.4kbits/s    
frame=  449 fps= 18 q=31.0 size=     640kB time=16.28 bitrate= 322.2kbits/s    
frame=  473 fps= 19 q=31.0 size=     674kB time=17.24 bitrate= 320.3kbits/s    
frame=  497 fps= 20 q=31.0 size=     707kB time=18.20 bitrate= 318.1kbits/s    frame=  520 fps= 20 q=31.0 size=     738kB time=19.12 bitrate= 316.1kbits/s    
frame=  539 fps= 20 q=30.0 size=     766kB time=19.88 bitrate= 315.7kbits/s    
frame=  559 fps= 21 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  577 fps= 21 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  593 fps= 21 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  610 fps= 21 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  625 fps= 22 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  637 fps= 22 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  655 fps= 22 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  678 fps= 22 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  698 fps= 22 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  717 fps= 23 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  737 fps= 23 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  757 fps= 23 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  776 fps= 23 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  793 fps= 24 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  811 fps= 24 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  831 fps= 24 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  851 fps= 24 q=30.0 size=     771kB time=20.02 bitrate= 315.6kbits/s    
frame=  862 fps= 24 q=30.0 Lsize=    1122kB time=20.02 bitrate= 459.1kbits/s dup=0 drop=1    
video:714kB audio:391kB global headers:0kB muxing overhead 1.519450%
[libx264 @ 0x804215810]frame I:13    Avg QP:27.17  size:  6300
[libx264 @ 0x804215810]frame P:365   Avg QP:27.92  size:  1491
[libx264 @ 0x804215810]frame B:484   Avg QP:31.19  size:   216
[libx264 @ 0x804215810]consecutive B-frames:  2.4% 53.0% 35.7%  9.0%
[libx264 @ 0x804215810]mb I  I16..4: 17.4% 71.6% 11.0%
[libx264 @ 0x804215810]mb P  I16..4:  0.2%  1.3%  0.1%  P16..4: 40.5% 14.5%  8.6%  0.0%  0.0%    skip:34.8%
[libx264 @ 0x804215810]mb B  I16..4:  0.0%  0.0%  0.0%  B16..8: 31.2%  1.1%  0.2%  direct: 0.3%  skip:67.2%  L0:24.1% L1:73.6% BI: 2.4%
[libx264 @ 0x804215810]final ratefactor: 24.90
[libx264 @ 0x804215810]8x8 transform intra:74.0% inter:73.6%
[libx264 @ 0x804215810]direct mvs  spatial:81.6% temporal:18.4%
[libx264 @ 0x804215810]coded y,uvDC,uvAC intra: 71.8% 65.9% 28.6% inter: 12.5% 9.4% 0.6%
[libx264 @ 0x804215810]i16 v,h,dc,p: 14% 17%  5% 64%
[libx264 @ 0x804215810]i8 v,h,dc,ddl,ddr,vr,hd,vl,hu:  5%  5%  3% 12% 18% 15% 17% 13% 13%
[libx264 @ 0x804215810]i4 v,h,dc,ddl,ddr,vr,hd,vl,hu:  5%  4%  5% 10% 17% 15% 15% 14% 14%
[libx264 @ 0x804215810]i8c dc,h,v,p: 47% 25% 15% 13%
[libx264 @ 0x804215810]Weighted P-Frames: Y:13.4% UV:8.2%
[libx264 @ 0x804215810]ref P L0: 70.7% 18.1%  7.4%  2.0%  1.7%  0.1%
[libx264 @ 0x804215810]ref B L0: 92.4%  4.7%  2.8%
[libx264 @ 0x804215810]kb/s:169.49
As it can be seen, ffmpeg goes on till it reaches the end of file. Also sound in output file disappears after 20s.

Thanks.