I found this neat little program called Movie2MPEG, to convert Quicktime MOV files to MPEG-1. I like it very much, but on today's encode I noticed some stuttering in the video. Has anyone experienced this using this program? I had only previously encoded short test clips, but today's encode was a 51 minute program ripped from DVD.

What's the latest version of this program? I can't even remember what I found it -- I've tried a search for it on Google, but no luck.