Hi - new user here
Tried to split a 3 hour movie (mkv) into 3 pieces and selected link video for the same time codes for the subtitle file. Specifying the break point as 3550s (econds) in the global tab and selecting link resulted in files which appeared to be a mixture of video segments always starting with the beginning of the master file.
The fix I found was to specify the file size rather than the time then the function worked perfectly.
Hope this helps some else
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You appear to have left out some vital information.
What program/utility are you referring to ?